github.com/alwaysproblem/mlserving-tutorial@v0.0.0-20221124033215-121cfddbfbf4/TFserving/CustomOp/custom-op/README.md (about) 1 # TensorFlow Custom Op 2 This is a guide for users who want to write custom c++ op for TensorFlow and distribute the op as a pip package. This repository serves as both a working example of the op building and packaging process, as well as a template/starting point for writing your own ops. The way this repository is set up allow you to build your custom ops from TensorFlow's pip package instead of building TensorFlow from scratch. This guarantee that the shared library you build will be binary compatible with TensorFlow's pip packages. 3 4 This guide currently supports Ubuntu and Windows custom ops, and it includes examples for both cpu and gpu ops. 5 6 Starting from Aug 1, 2019, nightly previews `tf-nightly` and `tf-nightly-gpu`, as well as 7 official releases `tensorflow` and `tensorflow-gpu` past version 1.14.0 are now built with a 8 different environment (Ubuntu 16.04 compared to Ubuntu 14.04, for example) as part of our effort to make TensorFlow's pip pacakges 9 manylinux2010 compatible. To help you building custom ops on linux, here we provide our toolchain in the format of a combination of a Docker image and bazel configurations. Please check the table below for the Docker image name needed to build your custom ops. 10 11 | | CPU custom op | GPU custom op | 12 |----------|:-------------------------------:|:------------------------------:| 13 | TF nightly | nightly-custom-op-ubuntu16 | nightly-custom-op-gpu-ubuntu16 | 14 | TF >= 2.3 | 2.3.0-custom-op-ubuntu16 | 2.3.0-custom-op-gpu-ubuntu16 | 15 | TF 1.5, 2.0 | custom-op-ubuntu16-cuda10.0 | custom-op-gpu-ubuntu16 | 16 | TF <= 1.4 | custom-op-ubuntu14 | custom-op-gpu-ubuntu14 | 17 18 19 Note: all above Docker images have prefix `tensorflow/tensorflow:` 20 21 The bazel configurations are included as part of this repository. 22 23 ## Build Example zero_out Op (CPU only) 24 If you want to try out the process of building a pip package for custom op, you can use the source code from this repository following the instructions below. 25 26 ### For Windows Users 27 You can skip this section if you are not building on Windows. If you are building custom ops for Windows platform, you will need similar setup as building TensorFlow from source mentioned [here](https://www.tensorflow.org/install/source_windows). Additionally, you can skip all the Docker steps from the instructions below. Otherwise, the bazel commands to build and test custom ops stay the same. 28 29 ### Setup Docker Container 30 You are going to build the op inside a Docker container. Pull the provided Docker image from TensorFlow's Docker hub and start a container. 31 32 Use the following command if the TensorFlow pip package you are building 33 against is not yet manylinux2010 compatible: 34 ```bash 35 docker pull tensorflow/tensorflow:custom-op-ubuntu14 36 docker run -it tensorflow/tensorflow:custom-op-ubuntu14 /bin/bash 37 ``` 38 And the following instead if it is manylinux2010 compatible: 39 40 ```bash 41 docker pull tensorflow/tensorflow:custom-op-ubuntu16 42 docker run -it tensorflow/tensorflow:custom-op-ubuntu16 /bin/bash 43 ``` 44 45 Inside the Docker container, clone this repository. The code in this repository came from the [Adding an op](https://www.tensorflow.org/extend/adding_an_op) guide. 46 ```bash 47 git clone https://github.com/tensorflow/custom-op.git 48 cd custom-op 49 ``` 50 51 ### Build PIP Package 52 You can build the pip package with either Bazel or make. 53 54 With bazel: 55 ```bash 56 ./configure.sh 57 bazel build build_pip_pkg 58 bazel-bin/build_pip_pkg artifacts 59 ``` 60 61 With Makefile: 62 ```bash 63 make zero_out_pip_pkg 64 ``` 65 66 ### Install and Test PIP Package 67 Once the pip package has been built, you can install it with, 68 ```bash 69 pip3 install artifacts/*.whl 70 ``` 71 Then test out the pip package 72 ```bash 73 cd .. 74 python3 -c "import tensorflow as tf;import tensorflow_zero_out;print(tensorflow_zero_out.zero_out([[1,2], [3,4]]))" 75 ``` 76 And you should see the op zeroed out all input elements except the first one: 77 ```bash 78 [[1 0] 79 [0 0]] 80 ``` 81 82 ## Create and Distribute Custom Ops 83 Now you are ready to write and distribute your own ops. The example in this repository has done the boiling plate work for setting up build systems and package files needed for creating a pip package. We recommend using this repository as a template. 84 85 86 ### Template Overview 87 First let's go through a quick overview of the folder structure of this template repository. 88 ``` 89 ├── gpu # Set up crosstool and CUDA libraries for Nvidia GPU, only needed for GPU ops 90 │ ├── crosstool/ 91 │ ├── cuda/ 92 │ ├── BUILD 93 │ └── cuda_configure.bzl 94 | 95 ├── tensorflow_zero_out # A CPU only op 96 │ ├── cc 97 │ │ ├── kernels # op kernel implementation 98 │ │ │ └── zero_out_kernels.cc 99 │ │ └── ops # op interface definition 100 │ │ └── zero_out_ops.cc 101 │ ├── python 102 │ │ ├── ops 103 │ │ │ ├── __init__.py 104 │ │ │ ├── zero_out_ops.py # Load and extend the ops in python 105 │ │ │ └── zero_out_ops_test.py # tests for ops 106 │ │ └── __init__.py 107 | | 108 │ ├── BUILD # BUILD file for all op targets 109 │ └── __init__.py # top level __init__ file that imports the custom op 110 │ 111 ├── tensorflow_time_two # A GPU op 112 │ ├── cc 113 │ │ ├── kernels # op kernel implementation 114 │ │ │ |── time_two.h 115 │ │ │ |── time_two_kernels.cc 116 │ │ │ └── time_two_kernels.cu.cc # GPU kernel 117 │ │ └── ops # op interface definition 118 │ │ └── time_two_ops.cc 119 │ ├── python 120 │ │ ├── ops 121 │ │ │ ├── __init__.py 122 │ │ │ ├── time_two_ops.py # Load and extend the ops in python 123 │ │ │ └── time_two_ops_test.py # tests for ops 124 │ │ └── __init__.py 125 | | 126 │ ├── BUILD # BUILD file for all op targets 127 │ └── __init__.py # top level __init__ file that imports the custom op 128 | 129 ├── tf # Set up TensorFlow pip package as external dependency for Bazel 130 │ ├── BUILD 131 │ ├── BUILD.tpl 132 │ └── tf_configure.bzl 133 | 134 ├── BUILD # top level Bazel BUILD file that contains pip package build target 135 ├── build_pip_pkg.sh # script to build pip package for Bazel and Makefile 136 ├── configure.sh # script to install TensorFlow and setup action_env for Bazel 137 ├── LICENSE 138 ├── Makefile # Makefile for building shared library and pip package 139 ├── setup.py # file for creating pip package 140 ├── MANIFEST.in # files for creating pip package 141 ├── README.md 142 └── WORKSPACE # Used by Bazel to specify tensorflow pip package as an external dependency 143 144 ``` 145 The op implementation, including both c++ and python code, goes under `tensorflow_zero_out` dir for CPU only ops, or `tensorflow_time_two` dir for GPU ops. You will want to replace either directory with the corresponding content of your own ops. `tf` folder contains the code for setting up TensorFlow pip package as an external dependency for Bazel only. You shouldn't need to change the content of this folder. You also don't need this folder if you are using other build systems, such as Makefile. The `gpu` folder contains the code for setting up CUDA libraries and toolchain. You only need the `gpu` folder if you are writing a GPU op and using bazel. To build a pip package for your op, you will also need to update a few files at the top level of the template, for example, `setup.py`, `MANIFEST.in` and `build_pip_pkg.sh`. 146 147 ### Setup 148 First, clone this template repo. 149 ```bash 150 git clone https://github.com/tensorflow/custom-op.git my_op 151 cd my_op 152 ``` 153 154 #### Docker 155 Next, set up a Docker container using the provided Docker image for building and testing the ops. We provide two sets of Docker images for different versions of pip packages. If the pip package you are building against was released before Aug 1, 2019 and has manylinux1 tag, please use Docker images `tensorflow/tensorflow:custom-op-ubuntu14` and `tensorflow/tensorflow:custom-op-gpu-ubuntu14`, which are based on Ubuntu 14.04. Otherwise, for the newer manylinux2010 packages, please use Docker images `tensorflow/tensorflow:custom-op-ubuntu16` and `tensorflow/tensorflow:custom-op-gpu-ubuntu16` instead. All Docker images come with Bazel pre-installed, as well as the corresponding toolchain used for building the released TensorFlow pacakges. We have seen many cases where dependency version differences and ABI incompatibilities cause the custom op extension users build to not work properly with TensorFlow's released pip packages. Therefore, it is *highly recommended* to use the provided Docker image to build your custom op. To get the CPU Docker image, run one of the following command based on which pip package you are building against: 156 ```bash 157 # For pip packages labeled manylinux1 158 docker pull tensorflow/tensorflow:custom-op-ubuntu14 159 160 # For manylinux2010 161 docker pull tensorflow/tensorflow:custom-op-ubuntu16 162 ``` 163 164 For GPU, run 165 ```bash 166 # For pip packages labeled manylinux1 167 docker pull tensorflow/tensorflow:custom-op-gpu-ubuntu14 168 169 # For manylinux2010 170 docker pull tensorflow/tensorflow:custom-op-gpu-ubuntu16 171 ``` 172 173 You might want to use Docker volumes to map a `work_dir` from host to the container, so that you can edit files on the host, and build with the latest changes in the Docker container. To do so, run the following for CPU 174 ```bash 175 # For pip packages labeled manylinux1 176 docker run -it -v ${PWD}:/working_dir -w /working_dir tensorflow/tensorflow:custom-op-ubuntu14 177 178 # For manylinux2010 179 docker run -it -v ${PWD}:/working_dir -w /working_dir tensorflow/tensorflow:custom-op-ubuntu16 180 ``` 181 182 For GPU, you want to use `nvidia-docker`: 183 ```bash 184 # For pip packages labeled manylinux1 185 docker run --runtime=nvidia --privileged -it -v ${PWD}:/working_dir -w /working_dir tensorflow/tensorflow:custom-op-gpu-ubuntu14 186 187 # For manylinux2010 188 docker run --runtime=nvidia --privileged -it -v ${PWD}:/working_dir -w /working_dir tensorflow/tensorflow:custom-op-gpu-ubuntu16 189 190 ``` 191 192 #### Run configure.sh 193 Last step before starting implementing the ops, you want to set up the build environment. The custom ops will need to depend on TensorFlow headers and shared library libtensorflow_framework.so, which are distributed with TensorFlow official pip package. If you would like to use Bazel to build your ops, you might also want to set a few action_envs so that Bazel can find the installed TensorFlow. We provide a `configure` script that does these for you. Simply run `./configure.sh` in the docker container and you are good to go. 194 195 196 ### Add Op Implementation 197 Now you are ready to implement your op. Following the instructions at [Adding a New Op](https://www.tensorflow.org/extend/adding_an_op), add definition of your op interface under `<your_op>/cc/ops/` and kernel implementation under `<your_op>/cc/kernels/`. 198 199 200 ### Build and Test CPU Op 201 202 #### Bazel 203 To build the custom op shared library with Bazel, follow the cc_binary example in [`tensorflow_zero_out/BUILD`](https://github.com/tensorflow/custom-op/blob/master/tensorflow_zero_out/BUILD#L5). You will need to depend on the header files and libtensorflow_framework.so from TensorFlow pip package to build your op. Earlier we mentioned that the template has already setup TensorFlow pip package as an external dependency in `tf` directory, and the pip package is listed as `local_config_tf` in [`WORKSPACE`](https://github.com/tensorflow/custom-op/blob/master/WORKSPACE) file. Your op can depend directly on TensorFlow header files and 'libtensorflow_framework.so' with the following: 204 ```python 205 deps = [ 206 "@local_config_tf//:libtensorflow_framework", 207 "@local_config_tf//:tf_header_lib", 208 ], 209 ``` 210 211 You will need to keep both above dependencies for your op. To build the shared library with Bazel, run the following command in your Docker container 212 ```bash 213 bazel build tensorflow_zero_out:python/ops/_zero_out_ops.so 214 ``` 215 216 #### Makefile 217 To build the custom op shared library with make, follow the example in [`Makefile`](https://github.com/tensorflow/custom-op/blob/master/Makefile) for `_zero_out_ops.so` and run the following command in your Docker container: 218 ```bash 219 make op 220 ``` 221 222 #### Extend and Test the Op in Python 223 Once you have built your custom op shared library, you can follow the example in [`tensorflow_zero_out/python/ops`](https://github.com/tensorflow/custom-op/tree/master/tensorflow_zero_out/python/ops), and instructions [here](https://www.tensorflow.org/extend/adding_an_op#use_the_op_in_python) to create a module in Python for your op. Both guides use TensorFlow API `tf.load_op_library`, which loads the shared library and registers the ops with the TensorFlow framework. 224 ```python 225 from tensorflow.python.framework import load_library 226 from tensorflow.python.platform import resource_loader 227 228 _zero_out_ops = load_library.load_op_library( 229 resource_loader.get_path_to_datafile('_zero_out_ops.so')) 230 zero_out = _zero_out_ops.zero_out 231 232 ``` 233 234 You can also add Python tests like what we have done in `tensorflow_zero_out/python/ops/zero_out_ops_test.py` to check that your op is working as intended. 235 236 237 ##### Run Tests with Bazel 238 To add the python library and tests targets to Bazel, please follow the examples for `py_library` target `tensorflow_zero_out:zero_out_ops_py` and `py_test` target `tensorflow_zero_out:zero_out_ops_py_test` in `tensorflow_zero_out/BUILD` file. To run your test with bazel, do the following in Docker container, 239 240 ```bash 241 bazel test tensorflow_zero_out:zero_out_ops_py_test 242 ``` 243 244 ##### Run Tests with Make 245 To add the test target to make, please follow the example in `Makefile`. To run your python test, simply run the following in Docker container, 246 ```bash 247 make test_zero_out 248 ``` 249 250 ### Build and Test GPU Op 251 252 #### Bazel 253 To build the custom GPU op shared library with Bazel, follow the cc_binary example in [`tensorflow_time_two/BUILD`](https://github.com/tensorflow/custom-op/blob/master/tensorflow_time_two/BUILD#L29). Similar to CPU custom ops, you can directly depend on TensorFlow header files and 'libtensorflow_framework.so' with the following: 254 ```python 255 deps = [ 256 "@local_config_tf//:libtensorflow_framework", 257 "@local_config_tf//:tf_header_lib", 258 ], 259 ``` 260 261 Additionally, when you ran configure inside the GPU container, `config=cuda` will be set for bazel command, which will also automatically include cuda shared library and cuda headers as part of the dependencies only for GPU version of the op: `if_cuda_is_configured([":cuda", "@local_config_cuda//cuda:cuda_headers"])`. 262 263 To build the shared library with Bazel, run the following command in your Docker container 264 ```bash 265 bazel build tensorflow_time_two:python/ops/_time_two_ops.so 266 ``` 267 268 #### Makefile 269 To build the custom op shared library with make, follow the example in [`Makefile`](https://github.com/tensorflow/custom-op/blob/master/Makefile) for `_time_two_ops.so` and run the following command in your Docker container: 270 ```bash 271 make time_two_op 272 ``` 273 274 #### Extend and Test the Op in Python 275 Once you have built your custom op shared library, you can follow the example in [`tensorflow_time_two/python/ops`](https://github.com/tensorflow/custom-op/tree/master/tensorflow_time_two/python/ops), and instructions [here](https://www.tensorflow.org/extend/adding_an_op#use_the_op_in_python) to create a module in Python for your op. This part is the same as CPU custom op as shown above. 276 277 278 ##### Run Tests with Bazel 279 Similar to CPU custom op, to run your test with bazel, do the following in Docker container, 280 281 ```bash 282 bazel test tensorflow_time_two:time_two_ops_py_test 283 ``` 284 285 ##### Run Tests with Make 286 To add the test target to make, please follow the example in `Makefile`. To run your python test, simply run the following in Docker container, 287 ```bash 288 make time_two_test 289 ``` 290 291 292 293 294 ### Build PIP Package 295 Now your op works, you might want to build a pip package for it so the community can also benefit from your work. This template provides the basic setup needed to build your pip package. First, you will need to update the following top level files based on your op. 296 297 - `setup.py` contains information about your package (such as the name and version) as well as which code files to include. 298 - `MANIFEST.in` contains the list of additional files you want to include in the source distribution. Here you want to make sure the shared library for your custom op is included in the pip package. 299 - `build_pip_pkg.sh` creates the package hierarchy, and calls `bdist_wheel` to assemble your pip package. 300 301 You can use either Bazel or Makefile to build the pip package. 302 303 304 #### Build with Bazel 305 You can find the target for pip package in the top level `BUILD` file. Inside the data list of this `build_pip_pkg` target, you want to include the python library target ` //tensorflow_zero_out:zero_out_py` in addition to the top level files. To build the pip package builder, run the following command in Docker container, 306 ```bash 307 bazel build :build_pip_pkg 308 ``` 309 310 The bazel build command creates a binary named build_pip_package, which you can use to build the pip package. For example, the following builds your .whl package in the `artifacts` directory: 311 ```bash 312 bazel-bin/build_pip_pkg artifacts 313 ``` 314 315 #### Build with make 316 Building with make also invoke the same `build_pip_pkg.sh` script. You can run, 317 ```bash 318 make pip_pkg 319 ``` 320 321 ### Test PIP Package 322 Before publishing your pip package, test your pip package. 323 ```bash 324 pip3 install artifacts/*.whl 325 python3 -c "import tensorflow as tf;import tensorflow_zero_out;print(tensorflow_zero_out.zero_out([[1,2], [3,4]]))" 326 ``` 327 328 329 ### Publish PIP Package 330 Once your pip package has been thoroughly tested, you can distribute your package by uploading your package to the Python Package Index. Please follow the [official instruction](https://packaging.python.org/tutorials/packaging-projects/#uploading-the-distribution-archives) from Pypi. 331 332 333 ### FAQ 334 335 Here are some issues our users have ran into and possible solutions. Feel free to send us a PR to add more entries. 336 337 338 | Issue | How to? | 339 |---|---| 340 | Do I need both the toolchain and the docker image? | Yes, you will need both to get the same setup we use to build TensorFlow's official pip package. | 341 | How do I also create a manylinux2010 binary? | You can use [auditwheel](https://github.com/pypa/auditwheel) version 2.0.0 or newer. | 342 | What do I do if I get `ValueError: Cannot repair wheel, because required library "libtensorflow_framework.so.1" could not be located` or `ValueError: Cannot repair wheel, because required library "libtensorflow_framework.so.2" could not be located` with auditwheel? | Please see [this related issue](https://github.com/tensorflow/tensorflow/issues/31807). | 343 | What do I do if I get `In file included from tensorflow_time_two/cc/kernels/time_two_kernels.cu.cc:21:0: /usr/local/lib/python3.6/dist-packages/tensorflow/include/tensorflow/core/util/gpu_kernel_helper.h:22:10: fatal error: third_party/gpus/cuda/include/cuda_fp16.h: No such file or directory` | Copy the CUDA header files to target directory. `mkdir -p /usr/local/lib/python3.6/dist-packages/tensorflow/include/third_party/gpus/cuda/include && cp -r /usr/local/cuda/targets/x86_64-linux/include/* /usr/local/lib/python3.6/dist-packages/tensorflow/include/third_party/gpus/cuda/include` |