github.com/AndrienkoAleksandr/go@v0.0.19/src/go/doc/testdata/examples/issue43658.go (about) 1 // Copyright ©2016 The Gonum Authors. All rights reserved. 2 // Copyright 2021 The Go Authors. All rights reserved. 3 // (above line required for our license-header checker) 4 // Use of this source code is governed by a BSD-style 5 // license that can be found in the LICENSE file. 6 7 package community_test 8 9 import ( 10 "fmt" 11 "log" 12 "sort" 13 14 "golang.org/x/exp/rand" 15 16 "gonum.org/v1/gonum/graph/community" 17 "gonum.org/v1/gonum/graph/internal/ordered" 18 "gonum.org/v1/gonum/graph/simple" 19 ) 20 21 func ExampleProfile_simple() { 22 // Profile calls Modularize which implements the Louvain modularization algorithm. 23 // Since this is a randomized algorithm we use a defined random source to ensure 24 // consistency between test runs. In practice, results will not differ greatly 25 // between runs with different PRNG seeds. 26 src := rand.NewSource(1) 27 28 // Create dumbell graph: 29 // 30 // 0 4 31 // |\ /| 32 // | 2 - 3 | 33 // |/ \| 34 // 1 5 35 // 36 g := simple.NewUndirectedGraph() 37 for u, e := range smallDumbell { 38 for v := range e { 39 g.SetEdge(simple.Edge{F: simple.Node(u), T: simple.Node(v)}) 40 } 41 } 42 43 // Get the profile of internal node weight for resolutions 44 // between 0.1 and 10 using logarithmic bisection. 45 p, err := community.Profile( 46 community.ModularScore(g, community.Weight, 10, src), 47 true, 1e-3, 0.1, 10, 48 ) 49 if err != nil { 50 log.Fatal(err) 51 } 52 53 // Print out each step with communities ordered. 54 for _, d := range p { 55 comm := d.Communities() 56 for _, c := range comm { 57 sort.Sort(ordered.ByID(c)) 58 } 59 sort.Sort(ordered.BySliceIDs(comm)) 60 fmt.Printf("Low:%.2v High:%.2v Score:%v Communities:%v Q=%.3v\n", 61 d.Low, d.High, d.Score, comm, community.Q(g, comm, d.Low)) 62 } 63 64 // Output: 65 // Low:0.1 High:0.29 Score:14 Communities:[[0 1 2 3 4 5]] Q=0.9 66 // Low:0.29 High:2.3 Score:12 Communities:[[0 1 2] [3 4 5]] Q=0.714 67 // Low:2.3 High:3.5 Score:4 Communities:[[0 1] [2] [3] [4 5]] Q=-0.31 68 // Low:3.5 High:10 Score:0 Communities:[[0] [1] [2] [3] [4] [5]] Q=-0.607 69 } 70 71 // intset is an integer set. 72 type intset map[int]struct{} 73 74 func linksTo(i ...int) intset { 75 if len(i) == 0 { 76 return nil 77 } 78 s := make(intset) 79 for _, v := range i { 80 s[v] = struct{}{} 81 } 82 return s 83 } 84 85 var ( 86 smallDumbell = []intset{ 87 0: linksTo(1, 2), 88 1: linksTo(2), 89 2: linksTo(3), 90 3: linksTo(4, 5), 91 4: linksTo(5), 92 5: nil, 93 } 94 95 // http://www.slate.com/blogs/the_world_/2014/07/17/the_middle_east_friendship_chart.html 96 middleEast = struct{ friends, complicated, enemies []intset }{ 97 // green cells 98 friends: []intset{ 99 0: nil, 100 1: linksTo(5, 7, 9, 12), 101 2: linksTo(11), 102 3: linksTo(4, 5, 10), 103 4: linksTo(3, 5, 10), 104 5: linksTo(1, 3, 4, 8, 10, 12), 105 6: nil, 106 7: linksTo(1, 12), 107 8: linksTo(5, 9, 11), 108 9: linksTo(1, 8, 12), 109 10: linksTo(3, 4, 5), 110 11: linksTo(2, 8), 111 12: linksTo(1, 5, 7, 9), 112 }, 113 114 // yellow cells 115 complicated: []intset{ 116 0: linksTo(2, 4), 117 1: linksTo(4, 8), 118 2: linksTo(0, 3, 4, 5, 8, 9), 119 3: linksTo(2, 8, 11), 120 4: linksTo(0, 1, 2, 8), 121 5: linksTo(2), 122 6: nil, 123 7: linksTo(9, 11), 124 8: linksTo(1, 2, 3, 4, 10, 12), 125 9: linksTo(2, 7, 11), 126 10: linksTo(8), 127 11: linksTo(3, 7, 9, 12), 128 12: linksTo(8, 11), 129 }, 130 131 // red cells 132 enemies: []intset{ 133 0: linksTo(1, 3, 5, 6, 7, 8, 9, 10, 11, 12), 134 1: linksTo(0, 2, 3, 6, 10, 11), 135 2: linksTo(1, 6, 7, 10, 12), 136 3: linksTo(0, 1, 6, 7, 9, 12), 137 4: linksTo(6, 7, 9, 11, 12), 138 5: linksTo(0, 6, 7, 9, 11), 139 6: linksTo(0, 1, 2, 3, 4, 5, 7, 8, 9, 10, 11, 12), 140 7: linksTo(0, 2, 3, 4, 5, 6, 8, 10), 141 8: linksTo(0, 6, 7), 142 9: linksTo(0, 3, 4, 5, 6, 10), 143 10: linksTo(0, 1, 2, 6, 7, 9, 11, 12), 144 11: linksTo(0, 1, 4, 5, 6, 10), 145 12: linksTo(0, 2, 3, 4, 6, 10), 146 }, 147 } 148 ) 149 150 var friends, enemies *simple.WeightedUndirectedGraph 151 152 func init() { 153 friends = simple.NewWeightedUndirectedGraph(0, 0) 154 for u, e := range middleEast.friends { 155 // Ensure unconnected nodes are included. 156 if friends.Node(int64(u)) == nil { 157 friends.AddNode(simple.Node(u)) 158 } 159 for v := range e { 160 friends.SetWeightedEdge(simple.WeightedEdge{F: simple.Node(u), T: simple.Node(v), W: 1}) 161 } 162 } 163 enemies = simple.NewWeightedUndirectedGraph(0, 0) 164 for u, e := range middleEast.enemies { 165 // Ensure unconnected nodes are included. 166 if enemies.Node(int64(u)) == nil { 167 enemies.AddNode(simple.Node(u)) 168 } 169 for v := range e { 170 enemies.SetWeightedEdge(simple.WeightedEdge{F: simple.Node(u), T: simple.Node(v), W: -1}) 171 } 172 } 173 } 174 175 func ExampleProfile_multiplex() { 176 // Profile calls ModularizeMultiplex which implements the Louvain modularization 177 // algorithm. Since this is a randomized algorithm we use a defined random source 178 // to ensure consistency between test runs. In practice, results will not differ 179 // greatly between runs with different PRNG seeds. 180 src := rand.NewSource(1) 181 182 // The undirected graphs, friends and enemies, are the political relationships 183 // in the Middle East as described in the Slate article: 184 // http://www.slate.com/blogs/the_world_/2014/07/17/the_middle_east_friendship_chart.html 185 g, err := community.NewUndirectedLayers(friends, enemies) 186 if err != nil { 187 log.Fatal(err) 188 } 189 weights := []float64{1, -1} 190 191 // Get the profile of internal node weight for resolutions 192 // between 0.1 and 10 using logarithmic bisection. 193 p, err := community.Profile( 194 community.ModularMultiplexScore(g, weights, true, community.WeightMultiplex, 10, src), 195 true, 1e-3, 0.1, 10, 196 ) 197 if err != nil { 198 log.Fatal(err) 199 } 200 201 // Print out each step with communities ordered. 202 for _, d := range p { 203 comm := d.Communities() 204 for _, c := range comm { 205 sort.Sort(ordered.ByID(c)) 206 } 207 sort.Sort(ordered.BySliceIDs(comm)) 208 fmt.Printf("Low:%.2v High:%.2v Score:%v Communities:%v Q=%.3v\n", 209 d.Low, d.High, d.Score, comm, community.QMultiplex(g, comm, weights, []float64{d.Low})) 210 } 211 212 // Output: 213 // Low:0.1 High:0.72 Score:26 Communities:[[0] [1 7 9 12] [2 8 11] [3 4 5 10] [6]] Q=[24.7 1.97] 214 // Low:0.72 High:1.1 Score:24 Communities:[[0 6] [1 7 9 12] [2 8 11] [3 4 5 10]] Q=[16.9 14.1] 215 // Low:1.1 High:1.2 Score:18 Communities:[[0 2 6 11] [1 7 9 12] [3 4 5 8 10]] Q=[9.16 25.1] 216 // Low:1.2 High:1.6 Score:10 Communities:[[0 3 4 5 6 10] [1 7 9 12] [2 8 11]] Q=[10.5 26.7] 217 // Low:1.6 High:1.6 Score:8 Communities:[[0 1 6 7 9 12] [2 8 11] [3 4 5 10]] Q=[5.56 39.8] 218 // Low:1.6 High:1.8 Score:2 Communities:[[0 2 3 4 5 6 10] [1 7 8 9 11 12]] Q=[-1.82 48.6] 219 // Low:1.8 High:2.3 Score:-6 Communities:[[0 2 3 4 5 6 8 10 11] [1 7 9 12]] Q=[-5 57.5] 220 // Low:2.3 High:2.4 Score:-10 Communities:[[0 1 2 6 7 8 9 11 12] [3 4 5 10]] Q=[-11.2 79] 221 // Low:2.4 High:4.3 Score:-52 Communities:[[0 1 2 3 4 5 6 7 8 9 10 11 12]] Q=[-46.1 117] 222 // Low:4.3 High:10 Score:-54 Communities:[[0 1 2 3 4 6 7 8 9 10 11 12] [5]] Q=[-82 254] 223 }