github.com/biogo/biogo@v1.0.4/align/matrix/matrices/NUC.4.4 (about)

     1  #
     2  # This matrix was created by Todd Lowe   12/10/92
     3  #
     4  # Uses ambiguous nucleotide codes, probabilities rounded to
     5  #  nearest integer
     6  #
     7  # Lowest score = -4, Highest score = 5
     8  #
     9      A   T   G   C   S   W   R   Y   K   M   B   V   H   D   N
    10  A   5  -4  -4  -4  -4   1   1  -4  -4   1  -4  -1  -1  -1  -2
    11  T  -4   5  -4  -4  -4   1  -4   1   1  -4  -1  -4  -1  -1  -2
    12  G  -4  -4   5  -4   1  -4   1  -4   1  -4  -1  -1  -4  -1  -2
    13  C  -4  -4  -4   5   1  -4  -4   1  -4   1  -1  -1  -1  -4  -2
    14  S  -4  -4   1   1  -1  -4  -2  -2  -2  -2  -1  -1  -3  -3  -1
    15  W   1   1  -4  -4  -4  -1  -2  -2  -2  -2  -3  -3  -1  -1  -1
    16  R   1  -4   1  -4  -2  -2  -1  -4  -2  -2  -3  -1  -3  -1  -1
    17  Y  -4   1  -4   1  -2  -2  -4  -1  -2  -2  -1  -3  -1  -3  -1
    18  K  -4   1   1  -4  -2  -2  -2  -2  -1  -4  -1  -3  -3  -1  -1
    19  M   1  -4  -4   1  -2  -2  -2  -2  -4  -1  -3  -1  -1  -3  -1
    20  B  -4  -1  -1  -1  -1  -3  -3  -1  -1  -3  -1  -2  -2  -2  -1
    21  V  -1  -4  -1  -1  -1  -3  -1  -3  -3  -1  -2  -1  -2  -2  -1
    22  H  -1  -1  -4  -1  -3  -1  -3  -1  -3  -1  -2  -2  -1  -2  -1  
    23  D  -1  -1  -1  -4  -3  -1  -1  -3  -1  -3  -2  -2  -2  -1  -1
    24  N  -2  -2  -2  -2  -1  -1  -1  -1  -1  -1  -1  -1  -1  -1  -1
    25