github.com/biogo/biogo@v1.0.4/io/seqio/fasta/testaln0_test.go (about) 1 package fasta 2 3 var testaln0 = `>AK1H_ECOLI/114-431 DESCRIPTION HERE 4 CPDSINAALICRGEKMSIAIMAGVLEARGH-N--VTVIDPVEKLLAVG-HYLESTVDIAE 5 STRRIAASRIP------A-DHMVLMAGFTAGN-EKGELVVLGRNGSDYSAAVLAACLRAD 6 CCEIWTDVNGVYTCDP-------------RQVPDARLLKSMSYQEAMELSY--FGAKVLH 7 PRTITPIAQFQIPCLIKNTGNPQAPGTL-IG--ASRDEDELP----VKGISNLN------ 8 NMAMFSVSGP-GMKGMVGMAARVFAAMS-------RARISVVLITQSSSEYSISFCVPQS 9 DCVRAERAMLEEFY-----LELKEGLLEPLAVAERLAIISV-VGDGLRTLRGISAKF--- 10 ---FAALARANINIVAIA 11 >AKH_HAEIN 114-431 12 -----------------VEDAVKATIDCRGEKLSIAMMKAWFEARGY-S--VHIVDPVKQ 13 LLAKG-GYLESSVEIEESTKRVDAANIA--K-DKVVLMAGF---TAGNEKGELVLLGRNG 14 SDYSAAC-----------------LAACLGASVCEIWTDVDGVYTCDP--RLVPDARLLP 15 TLSYREAMELSYFGAKVIHPRTIGPLLPQNIPCVIKNTGNPSAPGSI-ID--GNVKSESL 16 Q----VKGITNLDNLAMFNVSGPGMQGM---VGMASRVFSAMSGAGISVILITQSSSEYS 17 ---ISFCVPVKSAEVAKTVLETEFA-----NELNEHQLEPIEVIKDLSIISV-VGDGMKQ 18 AKGIAARF------FSALAQANISIVAIA 19 >AKH1_MAIZE/117-440 20 -----------------ATESFSDFVVGHGELWSAQMLSYAIQKSGT-P--CSWMDTREV 21 LVVNPSGANQVDPDYLESEKRLEKWFSRC-P-AETIIATGF---IASTPENIPTTLKRDG 22 SDFSAAI-----------------IGSLVKARQVTIWTDVDGVFSADP--RKVSEAVILS 23 TLSYQEAWEMSYFGANVLHPRTIIPVMKYNIPIVIRNIFNTSAPGTM-IC--QQPANENG 24 DLEACVKAFATIDKLALVNVEGTGMAGV---PGTANAIFGAVKDVGANVIMISQASSEHS 25 ---VCFAVPEKEVALVSAALHARFR-----EALAAGRLSKVEVIHNCSILAT-VGLRMAS 26 TPGVSATL------FDALAKANINVRAIA 27 >AK2H_ECOLI/112-431 28 -----------------INDAVYAEVVGHGEVWSARLMSAVLNQQG-----LPAAWLDAR 29 EFLRAERAAQPQVDEGLSYPLLQQLLVQH-P-GKRLVVTGF---ISRNNAGETVLLGRNG 30 SDYSATQ-----------------IGALAGVSRVTIWSDVAGVYSADP--RKVKDACLLP 31 LLRLDEASELARLAAPVLHARTLQPVSGSEIDLQLRCSYTPDQGSTRIERVLASGTGARI 32 VTSHDDVCLI-EFQVPASQDFKLAHKEI--DQILKRAQVRPLAVGVHNDRQLLQFCYTSE 33 VADSALKILDEAG---------LPGELRLRQGLALVAMVGAGVTRNPLHCHRFWQQLKGQ 34 PVEFTWQSDDGISLVAVL 35 >AK1_BACSU/66-374 36 -----------------ISPREQDLLLSCGETISSVVFTSMLLDNGVKA--AALTGAQAG 37 FLTNDQHTNAKIIEMKPER--LFSVLAN----HDAVVVAGF---QGATEKGDTTTIGRGG 38 SDTSAAA-----------------LGAAVDAEYIDIFTDVEGVMTADP--RVVENAKPLP 39 VVTYTEICNLAYQGAKVISPRAVEIAMQAKVPIRVRSTYS-NDKGTLVTSHHSSKVGSDV 40 FERLITGIAH-VKDVTQFKVPAKIGQYN-----VQTEVFKAMANAGISVDFFNITPSEIV 41 YTVAGNKTETAQR------------ILMDMGYDPMVTRNCAKVSAVGAGIMGVPGVTSKI 42 ------VSALSEKEIPILQSA 43 >AK2_BACST/63-370 44 -----------------KRE--MDMLLSTGEQVSIALLAMSLHEKGYKA--VSLTGWQAG 45 ITTEEMHGNARIMNIDTT--RIRRCLDE----GAIVIVAGF---QGVTETGEITTLGRGG 46 SDTTAVA-----------------LAAALKAEKCDIYTDVTGVFTTDP--RYVKTARKIK 47 EISYDEMLELANLGAGVLHPRAVEFAKNYEVPLEVRSSME-NERGTMVK--EEVSMEQHL 48 IVRGIAFEDQ-VTRVTVVGIEKYLQSVA--------TIFTALANRGINVDIIIQNA---- 49 ----------------TNSETAS--VSFSIRTEDLPETLQVLQ-------------ALEG 50 ADVHYESGLAKVSI-VGSGMISNPGVAARV------FEVLADQGIEIKMVS 51 >AK2_BACSU/63-373 52 -----------------KRE--MDMLLATGEQVTISLLSMALQEKGYDA--VSYTGWQAG 53 IRTEAIHGNARITDIDTS--VLADQLEK----GKIVIVAGF---QGMTEDCEITTLGRGG 54 SDTTAVA-----------------LAAALKVDKCDIYTDVPGVFTTDP--RYVKSARKLE 55 GISYDEMLELANLGAGVLHPRAVEFAKNYQVPLEVRSSTE-TEAGTLIE--EESSMEQNL 56 IVRGIAFEDQ-ITRVTIYGLTSGLTTLS--------TIFTTLAKRNINVDIIIQTQ---- 57 ----------------AEDKTG---ISFSVKTEDADQTVAVLEEYK---------DALEF 58 EKIETESKLAKVSI-VGSGMVSNPGVAAEM------FAVLAQKNILIKMVS 59 >AKAB_CORFL/63-379 60 -----------------ARE--MDMLLTAGERISNALVAMAIESLGAEA--QSFTGSQAG 61 VLTTERHGNARIVDVTPG--RVREALDE----GKICIVAGF--QGVNKETRDVTTLGRGG 62 SDTTAVA-----------------LAAALNADVCEIYSDVDGVYTADP--RIVPNAQKLE 63 KLSFEEMLELAAVGSKILVLRSVEYARAFNVPLRVRSSYS-NDPGTLIAGSMEDIPVEEA 64 VLTGVATDKS-EAKVTVLGISDKPGEAA--------KVFRALADAEINIDMVLQNV---- 65 ----------------SSVEDGTTDITFTCPRADGRRAMEILKKLQ---------VQGNW 66 TNVLYDDQVDKVSL-VGAGMKSHPGVTAEF------MEALRDVNVNIELIS 67 >AKAB_MYCSM/63-379 68 -----------------PRE--MDMLLTAGERISNALVAMAIESLGAQA--RSFTGSQAG 69 VITTGTHGNAKIIDVTPG--RLRDALDE----GQIVLVAGF--QGVSQDSKDVTTLGRGG 70 SDTTAVA-----------------VAAALDADVCEIYTDVDGIFTADP--RIVPNARHLD 71 TVSFEEMLEMAACGAKVLMLRCVEYARRYNVPIHVRSSYS-DKPGTIVKGSIEDIPMEDA 72 ILTGVAHDRS-EAKVTVVGLPDVPGYAA--------KVFRAVAEADVNIDMVLQNI---- 73 ----------------SKIEDGKTDITFTCARDNGPRAVEKLSALK---------SEIGF 74 SQVLYDDHIGKVSL-IGAGMRSHPGVTATF------CEALAEAGINIDLIS 75 >AK3_ECOLI/106-407 76 -----------------TSPALTDELVSHGELMSTLLFVEILRERD--V--QAQWFDVRK 77 VMRTNDRFGRAEPDIAALAELAALQLLPR-LNEGLVITQGF---IGSENKGRTTTLGRGG 78 SDYTAAL-----------------LAEALHASRVDIWTDVPGIYTTDP--RVVSAAKRID 79 EIAFAEAAEMATFGAKVLHPATLLPAVRSDIPVFVGSSKDPRAGGTLVCNKTENPPLFRA 80 LAL--RRNQT-LLTLHSLNMLHSRGFLA--------EVFGILARHNISVDLITTSEVSVA 81 LTLDTTGSTSTG----------DTLLTQSLLMELSALCRVEVEEGLALVALIG------- 82 ---NDLSKACGVGKEVF 83 >AK_YEAST/134-472 A COMMENT FOR YEAST 84 -----------------VSSRTVDLVMSCGEKLSCLFMTALCNDRGCKAKYVDLSHIVPS 85 DFSASALDNSFYTFLVQALKEKLAPFVSA-KERIVPVFTGF---FGLVPTGLLNGVGRGY 86 TDLCAAL-----------------IAVAVNADELQVWKEVDGIFTADP--RKVPEARLLD 87 SVTPEEASELTYYGSEVIHPFTMEQVIRAKIPIRIKNVQNPLGNGTIIYPDNVAKKGEST 88 PPHPPENLSS----SFYEKRKRGATAITTKN----DIFVINIHSNKKTLSHGFLAQIFTI 89 LDKYKLVVDLISTSEVHVSMALPIPDADS-LKSLRQAEEKLRILGSVDITKKLSIVSLVG 90 KHMKQYIGIAG---TMFTTLAEEGINIEMIS 91 `