github.com/biogo/biogo@v1.0.4/io/seqio/fasta/testaln1_test.go (about) 1 package fasta 2 3 var testaln1 = `>AK1H_ECOLI/114-431 DESCRIPTION HERE 4 CPDSINAALICRGEKMSIAIMAGVLEARGH-N--VTVIDPVEKLLAVG-HYLESTVDIAE 5 6 STRRIAASRIP------A-DHMVLMAGFTAGN-EKGELVVLGRNGSDYSAAVLAACLRAD 7 8 CCEIWTDVNGVYTCDP-------------RQVPDARLLKSMSYQEAMELSY--FGAKVLH 9 PRTITPIAQFQIPCLIKNTGNPQAPGTL-IG--ASRDEDELP----VKGISNLN------ 10 NMAMFSVSGP-GMKGMVGMAARVFAAMS-------RARISVVLITQSSSEYSISFCVPQS 11 DCVRAERAMLEEFY-----LELKEGLLEPLAVAERLAIISV-VGDGLRTLRGISAKF--- 12 ---FAALARANINIVAIA 13 14 >AKH_HAEIN 114-431 15 16 -----------------VEDAVKATIDCRGEKLSIAMMKAWFEARGY-S--VHIVDPVKQ 17 LLAKG-GYLESSVEIEESTKRVDAANIA--K-DKVVLMAGF---TAGNEKGELVLLGRNG 18 SDYSAAC-----------------LAACLGASVCEIWTDVDGVYTCDP--RLVPDARLLP 19 TLSYREAMELSYFGAKVIHPRTIGPLLPQNIPCVIKNTGNPSAPGSI-ID--GNVKSESL 20 Q----VKGITNLDNLAMFNVSGPGMQGM---VGMASRVFSAMSGAGISVILITQSSSEYS 21 ---ISFCVPVKSAEVAKTVLETEFA-----NELNEHQLEPIEVIKDLSIISV-VGDGMKQ 22 AKGIAARF------FSALAQANISIVAIA 23 >AKH1_MAIZE/117-440 24 -----------------ATESFSDFVVGHGELWSAQMLSYAIQKSGT-P--CSWMDTREV 25 LVVNPSGANQVDPDYLESEKRLEKWFSRC-P-AETIIATGF---IASTPENIPTTLKRDG 26 SDFSAAI-----------------IGSLVKARQVTIWTDVDGVFSADP--RKVSEAVILS 27 TLSYQEAWEMSYFGANVLHPRTIIPVMKYNIPIVIRNIFNTSAPGTM-IC--QQPANENG 28 29 DLEACVKAFATIDKLALVNVEGTGMAGV---PGTANAIFGAVKDVGANVIMISQASSEHS 30 31 ---VCFAVPEKEVALVSAALHARFR-----EALAAGRLSKVEVIHNCSILAT-VGLRMAS 32 TPGVSATL------FDALAKANINVRAIA 33 >AK2H_ECOLI/112-431 34 -----------------INDAVYAEVVGHGEVWSARLMSAVLNQQG-----LPAAWLDAR 35 EFLRAERAAQPQVDEGLSYPLLQQLLVQH-P-GKRLVVTGF---ISRNNAGETVLLGRNG 36 SDYSATQ-----------------IGALAGVSRVTIWSDVAGVYSADP--RKVKDACLLP 37 38 LLRLDEASELARLAAPVLHARTLQPVSGSEIDLQLRCSYTPDQGSTRIERVLASGTGARI 39 40 41 42 VTSHDDVCLI-EFQVPASQDFKLAHKEI--DQILKRAQVRPLAVGVHNDRQLLQFCYTSE 43 44 VADSALKILDEAG---------LPGELRLRQGLALVAMVGAGVTRNPLHCHRFWQQLKGQ 45 PVEFTWQSDDGISLVAVL 46 >AK1_BACSU/66-374 47 -----------------ISPREQDLLLSCGETISSVVFTSMLLDNGVKA--AALTGAQAG 48 FLTNDQHTNAKIIEMKPER--LFSVLAN----HDAVVVAGF---QGATEKGDTTTIGRGG 49 50 SDTSAAA-----------------LGAAVDAEYIDIFTDVEGVMTADP--RVVENAKPLP 51 52 VVTYTEICNLAYQGAKVISPRAVEIAMQAKVPIRVRSTYS-NDKGTLVTSHHSSKVGSDV 53 54 FERLITGIAH-VKDVTQFKVPAKIGQYN-----VQTEVFKAMANAGISVDFFNITPSEIV 55 56 YTVAGNKTETAQR------------ILMDMGYDPMVTRNCAKVSAVGAGIMGVPGVTSKI 57 ------VSALSEKEIPILQSA 58 >AK2_BACST/63-370 59 -----------------KRE--MDMLLSTGEQVSIALLAMSLHEKGYKA--VSLTGWQAG 60 ITTEEMHGNARIMNIDTT--RIRRCLDE----GAIVIVAGF---QGVTETGEITTLGRGG 61 SDTTAVA-----------------LAAALKAEKCDIYTDVTGVFTTDP--RYVKTARKIK 62 63 EISYDEMLELANLGAGVLHPRAVEFAKNYEVPLEVRSSME-NERGTMVK--EEVSMEQHL 64 IVRGIAFEDQ-VTRVTVVGIEKYLQSVA--------TIFTALANRGINVDIIIQNA---- 65 ----------------TNSETAS--VSFSIRTEDLPETLQVLQ-------------ALEG 66 ADVHYESGLAKVSI-VGSGMISNPGVAARV------FEVLADQGIEIKMVS 67 >AK2_BACSU/63-373 68 -----------------KRE--MDMLLATGEQVTISLLSMALQEKGYDA--VSYTGWQAG 69 70 IRTEAIHGNARITDIDTS--VLADQLEK----GKIVIVAGF---QGMTEDCEITTLGRGGSDTTAVA-----------------LAAALKVDKCDIYTDVPGVFTTDP--RYVKSARKLE 71 GISYDEMLELANLGAGVLHPRAVEFAKNYQVPLEVRSSTE-TEAGTLIE--EESSMEQNL 72 73 74 IVRGIAFEDQ-ITRVTIYGLTSGLTTLS--------TIFTTLAKRNINVDIIIQTQ---- 75 ----------------AEDKTG---ISFSVKTEDADQTVAVLEEYK---------DALEF 76 EKIETESKLAKVSI-VGSGMVSNPGVAAEM------FAVLAQKNILIKMVS 77 >AKAB_CORFL/63-379 78 -----------------ARE--MDMLLTAGERISNALVAMAIESLGAEA--QSFTGSQAG 79 VLTTERHGNARIVDVTPG--RVREALDE----GKICIVAGF--QGVNKETRDVTTLGRGG 80 SDTTAVA-----------------LAAALNADVCEIYSDVDGVYTADP--RIVPNAQKLE 81 KLSFEEMLELAAVGSKILVLRSVEYARAFNVPLRVRSSYS-NDPGTLIAGSMEDIPVEEA 82 VLTGVATDKS-EAKVTVLGISDKPGEAA--------KVFRALADAEINIDMVLQNV---- 83 ----------------SSVEDGTTDITFTCPRADGRRAMEILKKLQ---------VQGNW 84 TNVLYDDQVDKVSL-VGAGMKSHPGVTAEF------MEALRDVNVNIELIS 85 >AKAB_MYCSM/63-379 86 -----------------PRE--MDMLLTAGERISNALVAMAIESLGAQA--RSFTGSQAG 87 VITTGTHGNAKIIDVTPG--RLRDALDE----GQIVLVAGF--QGVSQDSKDVTTLGRGG 88 SDTTAVA-----------------VAAALDADVCEIYTDVDGIFTADP--RIVPNARHLD 89 TVSFEEMLEMAACGAKVLMLRCVEYARRYNVPIHVRSSYS-DKPGTIVKGSIEDIPMEDA 90 ILTGVAHDRS-EAKVTVVGLPDVPGYAA--------KVFRAVAEADVNIDMVLQNI---- 91 ----------------SKIEDGKTDITFTCARDNGPRAVEKLSALK---------SEIGF 92 SQVLYDDHIGKVSL-IGAGMRSHPGVTATF------CEALAEAGINIDLIS 93 >AK3_ECOLI/106-407 94 -----------------TSPALTDELVSHGELMSTLLFVEILRERD--V--QAQWFDVRK 95 VMRTNDRFGRAEPDIAALAELAALQLLPR-LNEGLVITQGF---IGSENKGRTTTLGRGG 96 SDYTAAL-----------------LAEALHASRVDIWTDVPGIYTTDP--RVVSAAKRID 97 EIAFAEAAEMATFGAKVLHPATLLPAVRSDIPVFVGSSKDPRAGGTLVCNKTENPPLFRA 98 LAL--RRNQT-LLTLHSLNMLHSRGFLA--------EVFGILARHNISVDLITTSEVSVA 99 LTLDTTGSTSTG----------DTLLTQSLLMELSALCRVEVEEGLALVALIG------- 100 ---NDLSKACGVGKEVF 101 >AK_YEAST/134-472 A COMMENT FOR YEAST 102 -----------------VSSRTVDLVMSCGEKLSCLFMTALCNDRGCKAKYVDLSHIVPS 103 DFSASALDNSFYTFLVQALKEKLAPFVSA-KERIVPVFTGF---FGLVPTGLLNGVGRGY 104 TDLCAAL-----------------IAVAVNADELQVWKEVDGIFTADP--RKVPEARLLD 105 SVTPEEASELTYYGSEVIHPFTMEQVIRAKIPIRIKNVQNPLGNGTIIYPDNVAKKGEST 106 PPHPPENLSS----SFYEKRKRGATAITTKN----DIFVINIHSNKKTLSHGFLAQIFTI 107 LDKYKLVVDLISTSEVHVSMALPIPDADS-LKSLRQAEEKLRILGSVDITKKLSIVSLVG 108 KHMKQYIGIAG---TMFTTLAEEGINIEMIS`