github.com/informationsea/shellflow@v0.1.3/default_config.toml (about) 1 [[Command]] 2 RegExp = "mkdir +(-p +)?[^;&]+" 3 RunImmediate = true 4 5 [[Command]] 6 RegExp = "example_dont_inheirt_path" 7 DontInheirtPath = true 8 9 [[Command]] 10 RegExp = "gatk .*" 11 SGEOption = ["-l", "s_vmem=20G,mem_req=20G", "-pe", "def_slot", "2"] 12 13 [[Command]] 14 RegExp = "samtools .*" 15 SGEOption = ["-l", "s_vmem=10G,mem_req=10G", "-pe", "def_slot", "2"] 16 17 [[Command]] 18 RegExp = "java .*" 19 SGEOption = ["-l", "s_vmem=40G,mem_req=40G"] 20