github.com/kaydxh/golang@v0.0.131/pkg/gocv/cgo/third_path/pybind11/tests/test_numpy_array.cpp (about) 1 /* 2 tests/test_numpy_array.cpp -- test core array functionality 3 4 Copyright (c) 2016 Ivan Smirnov <i.s.smirnov@gmail.com> 5 6 All rights reserved. Use of this source code is governed by a 7 BSD-style license that can be found in the LICENSE file. 8 */ 9 10 #include <pybind11/numpy.h> 11 #include <pybind11/stl.h> 12 13 #include "pybind11_tests.h" 14 15 #include <cstdint> 16 #include <utility> 17 18 // Size / dtype checks. 19 struct DtypeCheck { 20 py::dtype numpy{}; 21 py::dtype pybind11{}; 22 }; 23 24 template <typename T> 25 DtypeCheck get_dtype_check(const char *name) { 26 py::module_ np = py::module_::import("numpy"); 27 DtypeCheck check{}; 28 check.numpy = np.attr("dtype")(np.attr(name)); 29 check.pybind11 = py::dtype::of<T>(); 30 return check; 31 } 32 33 std::vector<DtypeCheck> get_concrete_dtype_checks() { 34 return {// Normalization 35 get_dtype_check<std::int8_t>("int8"), 36 get_dtype_check<std::uint8_t>("uint8"), 37 get_dtype_check<std::int16_t>("int16"), 38 get_dtype_check<std::uint16_t>("uint16"), 39 get_dtype_check<std::int32_t>("int32"), 40 get_dtype_check<std::uint32_t>("uint32"), 41 get_dtype_check<std::int64_t>("int64"), 42 get_dtype_check<std::uint64_t>("uint64")}; 43 } 44 45 struct DtypeSizeCheck { 46 std::string name{}; 47 int size_cpp{}; 48 int size_numpy{}; 49 // For debugging. 50 py::dtype dtype{}; 51 }; 52 53 template <typename T> 54 DtypeSizeCheck get_dtype_size_check() { 55 DtypeSizeCheck check{}; 56 check.name = py::type_id<T>(); 57 check.size_cpp = sizeof(T); 58 check.dtype = py::dtype::of<T>(); 59 check.size_numpy = check.dtype.attr("itemsize").template cast<int>(); 60 return check; 61 } 62 63 std::vector<DtypeSizeCheck> get_platform_dtype_size_checks() { 64 return { 65 get_dtype_size_check<short>(), 66 get_dtype_size_check<unsigned short>(), 67 get_dtype_size_check<int>(), 68 get_dtype_size_check<unsigned int>(), 69 get_dtype_size_check<long>(), 70 get_dtype_size_check<unsigned long>(), 71 get_dtype_size_check<long long>(), 72 get_dtype_size_check<unsigned long long>(), 73 }; 74 } 75 76 // Arrays. 77 using arr = py::array; 78 using arr_t = py::array_t<uint16_t, 0>; 79 static_assert(std::is_same<arr_t::value_type, uint16_t>::value, ""); 80 81 template <typename... Ix> 82 arr data(const arr &a, Ix... index) { 83 return arr(a.nbytes() - a.offset_at(index...), (const uint8_t *) a.data(index...)); 84 } 85 86 template <typename... Ix> 87 arr data_t(const arr_t &a, Ix... index) { 88 return arr(a.size() - a.index_at(index...), a.data(index...)); 89 } 90 91 template <typename... Ix> 92 arr &mutate_data(arr &a, Ix... index) { 93 auto *ptr = (uint8_t *) a.mutable_data(index...); 94 for (py::ssize_t i = 0; i < a.nbytes() - a.offset_at(index...); i++) { 95 ptr[i] = (uint8_t) (ptr[i] * 2); 96 } 97 return a; 98 } 99 100 template <typename... Ix> 101 arr_t &mutate_data_t(arr_t &a, Ix... index) { 102 auto ptr = a.mutable_data(index...); 103 for (py::ssize_t i = 0; i < a.size() - a.index_at(index...); i++) { 104 ptr[i]++; 105 } 106 return a; 107 } 108 109 template <typename... Ix> 110 py::ssize_t index_at(const arr &a, Ix... idx) { 111 return a.index_at(idx...); 112 } 113 template <typename... Ix> 114 py::ssize_t index_at_t(const arr_t &a, Ix... idx) { 115 return a.index_at(idx...); 116 } 117 template <typename... Ix> 118 py::ssize_t offset_at(const arr &a, Ix... idx) { 119 return a.offset_at(idx...); 120 } 121 template <typename... Ix> 122 py::ssize_t offset_at_t(const arr_t &a, Ix... idx) { 123 return a.offset_at(idx...); 124 } 125 template <typename... Ix> 126 py::ssize_t at_t(const arr_t &a, Ix... idx) { 127 return a.at(idx...); 128 } 129 template <typename... Ix> 130 arr_t &mutate_at_t(arr_t &a, Ix... idx) { 131 a.mutable_at(idx...)++; 132 return a; 133 } 134 135 #define def_index_fn(name, type) \ 136 sm.def(#name, [](type a) { return name(a); }); \ 137 sm.def(#name, [](type a, int i) { return name(a, i); }); \ 138 sm.def(#name, [](type a, int i, int j) { return name(a, i, j); }); \ 139 sm.def(#name, [](type a, int i, int j, int k) { return name(a, i, j, k); }); 140 141 template <typename T, typename T2> 142 py::handle auxiliaries(T &&r, T2 &&r2) { 143 if (r.ndim() != 2) { 144 throw std::domain_error("error: ndim != 2"); 145 } 146 py::list l; 147 l.append(*r.data(0, 0)); 148 l.append(*r2.mutable_data(0, 0)); 149 l.append(r.data(0, 1) == r2.mutable_data(0, 1)); 150 l.append(r.ndim()); 151 l.append(r.itemsize()); 152 l.append(r.shape(0)); 153 l.append(r.shape(1)); 154 l.append(r.size()); 155 l.append(r.nbytes()); 156 return l.release(); 157 } 158 159 // note: declaration at local scope would create a dangling reference! 160 static int data_i = 42; 161 162 TEST_SUBMODULE(numpy_array, sm) { 163 try { 164 py::module_::import("numpy"); 165 } catch (const py::error_already_set &) { 166 return; 167 } 168 169 // test_dtypes 170 py::class_<DtypeCheck>(sm, "DtypeCheck") 171 .def_readonly("numpy", &DtypeCheck::numpy) 172 .def_readonly("pybind11", &DtypeCheck::pybind11) 173 .def("__repr__", [](const DtypeCheck &self) { 174 return py::str("<DtypeCheck numpy={} pybind11={}>").format(self.numpy, self.pybind11); 175 }); 176 sm.def("get_concrete_dtype_checks", &get_concrete_dtype_checks); 177 178 py::class_<DtypeSizeCheck>(sm, "DtypeSizeCheck") 179 .def_readonly("name", &DtypeSizeCheck::name) 180 .def_readonly("size_cpp", &DtypeSizeCheck::size_cpp) 181 .def_readonly("size_numpy", &DtypeSizeCheck::size_numpy) 182 .def("__repr__", [](const DtypeSizeCheck &self) { 183 return py::str("<DtypeSizeCheck name='{}' size_cpp={} size_numpy={} dtype={}>") 184 .format(self.name, self.size_cpp, self.size_numpy, self.dtype); 185 }); 186 sm.def("get_platform_dtype_size_checks", &get_platform_dtype_size_checks); 187 188 // test_array_attributes 189 sm.def("ndim", [](const arr &a) { return a.ndim(); }); 190 sm.def("shape", [](const arr &a) { return arr(a.ndim(), a.shape()); }); 191 sm.def("shape", [](const arr &a, py::ssize_t dim) { return a.shape(dim); }); 192 sm.def("strides", [](const arr &a) { return arr(a.ndim(), a.strides()); }); 193 sm.def("strides", [](const arr &a, py::ssize_t dim) { return a.strides(dim); }); 194 sm.def("writeable", [](const arr &a) { return a.writeable(); }); 195 sm.def("size", [](const arr &a) { return a.size(); }); 196 sm.def("itemsize", [](const arr &a) { return a.itemsize(); }); 197 sm.def("nbytes", [](const arr &a) { return a.nbytes(); }); 198 sm.def("owndata", [](const arr &a) { return a.owndata(); }); 199 200 // test_index_offset 201 def_index_fn(index_at, const arr &); 202 def_index_fn(index_at_t, const arr_t &); 203 def_index_fn(offset_at, const arr &); 204 def_index_fn(offset_at_t, const arr_t &); 205 // test_data 206 def_index_fn(data, const arr &); 207 def_index_fn(data_t, const arr_t &); 208 // test_mutate_data, test_mutate_readonly 209 def_index_fn(mutate_data, arr &); 210 def_index_fn(mutate_data_t, arr_t &); 211 def_index_fn(at_t, const arr_t &); 212 def_index_fn(mutate_at_t, arr_t &); 213 214 // test_make_c_f_array 215 sm.def("make_f_array", [] { return py::array_t<float>({2, 2}, {4, 8}); }); 216 sm.def("make_c_array", [] { return py::array_t<float>({2, 2}, {8, 4}); }); 217 218 // test_empty_shaped_array 219 sm.def("make_empty_shaped_array", [] { return py::array(py::dtype("f"), {}, {}); }); 220 // test numpy scalars (empty shape, ndim==0) 221 sm.def("scalar_int", []() { return py::array(py::dtype("i"), {}, {}, &data_i); }); 222 223 // test_wrap 224 sm.def("wrap", [](const py::array &a) { 225 return py::array(a.dtype(), 226 {a.shape(), a.shape() + a.ndim()}, 227 {a.strides(), a.strides() + a.ndim()}, 228 a.data(), 229 a); 230 }); 231 232 // test_numpy_view 233 struct ArrayClass { 234 int data[2] = {1, 2}; 235 ArrayClass() { py::print("ArrayClass()"); } 236 ~ArrayClass() { py::print("~ArrayClass()"); } 237 }; 238 py::class_<ArrayClass>(sm, "ArrayClass") 239 .def(py::init<>()) 240 .def("numpy_view", [](py::object &obj) { 241 py::print("ArrayClass::numpy_view()"); 242 auto &a = obj.cast<ArrayClass &>(); 243 return py::array_t<int>({2}, {4}, a.data, obj); 244 }); 245 246 // test_cast_numpy_int64_to_uint64 247 sm.def("function_taking_uint64", [](uint64_t) {}); 248 249 // test_isinstance 250 sm.def("isinstance_untyped", [](py::object yes, py::object no) { 251 return py::isinstance<py::array>(std::move(yes)) 252 && !py::isinstance<py::array>(std::move(no)); 253 }); 254 sm.def("isinstance_typed", [](const py::object &o) { 255 return py::isinstance<py::array_t<double>>(o) && !py::isinstance<py::array_t<int>>(o); 256 }); 257 258 // test_constructors 259 sm.def("default_constructors", []() { 260 return py::dict("array"_a = py::array(), 261 "array_t<int32>"_a = py::array_t<std::int32_t>(), 262 "array_t<double>"_a = py::array_t<double>()); 263 }); 264 sm.def("converting_constructors", [](const py::object &o) { 265 return py::dict("array"_a = py::array(o), 266 "array_t<int32>"_a = py::array_t<std::int32_t>(o), 267 "array_t<double>"_a = py::array_t<double>(o)); 268 }); 269 270 // test_overload_resolution 271 sm.def("overloaded", [](const py::array_t<double> &) { return "double"; }); 272 sm.def("overloaded", [](const py::array_t<float> &) { return "float"; }); 273 sm.def("overloaded", [](const py::array_t<int> &) { return "int"; }); 274 sm.def("overloaded", [](const py::array_t<unsigned short> &) { return "unsigned short"; }); 275 sm.def("overloaded", [](const py::array_t<long long> &) { return "long long"; }); 276 sm.def("overloaded", 277 [](const py::array_t<std::complex<double>> &) { return "double complex"; }); 278 sm.def("overloaded", [](const py::array_t<std::complex<float>> &) { return "float complex"; }); 279 280 sm.def("overloaded2", 281 [](const py::array_t<std::complex<double>> &) { return "double complex"; }); 282 sm.def("overloaded2", [](const py::array_t<double> &) { return "double"; }); 283 sm.def("overloaded2", 284 [](const py::array_t<std::complex<float>> &) { return "float complex"; }); 285 sm.def("overloaded2", [](const py::array_t<float> &) { return "float"; }); 286 287 // [workaround(intel)] ICC 20/21 breaks with py::arg().stuff, using py::arg{}.stuff works. 288 289 // Only accept the exact types: 290 sm.def( 291 "overloaded3", [](const py::array_t<int> &) { return "int"; }, py::arg{}.noconvert()); 292 sm.def( 293 "overloaded3", 294 [](const py::array_t<double> &) { return "double"; }, 295 py::arg{}.noconvert()); 296 297 // Make sure we don't do unsafe coercion (e.g. float to int) when not using forcecast, but 298 // rather that float gets converted via the safe (conversion to double) overload: 299 sm.def("overloaded4", [](const py::array_t<long long, 0> &) { return "long long"; }); 300 sm.def("overloaded4", [](const py::array_t<double, 0> &) { return "double"; }); 301 302 // But we do allow conversion to int if forcecast is enabled (but only if no overload matches 303 // without conversion) 304 sm.def("overloaded5", [](const py::array_t<unsigned int> &) { return "unsigned int"; }); 305 sm.def("overloaded5", [](const py::array_t<double> &) { return "double"; }); 306 307 // test_greedy_string_overload 308 // Issue 685: ndarray shouldn't go to std::string overload 309 sm.def("issue685", [](const std::string &) { return "string"; }); 310 sm.def("issue685", [](const py::array &) { return "array"; }); 311 sm.def("issue685", [](const py::object &) { return "other"; }); 312 313 // test_array_unchecked_fixed_dims 314 sm.def( 315 "proxy_add2", 316 [](py::array_t<double> a, double v) { 317 auto r = a.mutable_unchecked<2>(); 318 for (py::ssize_t i = 0; i < r.shape(0); i++) { 319 for (py::ssize_t j = 0; j < r.shape(1); j++) { 320 r(i, j) += v; 321 } 322 } 323 }, 324 py::arg{}.noconvert(), 325 py::arg()); 326 327 sm.def("proxy_init3", [](double start) { 328 py::array_t<double, py::array::c_style> a({3, 3, 3}); 329 auto r = a.mutable_unchecked<3>(); 330 for (py::ssize_t i = 0; i < r.shape(0); i++) { 331 for (py::ssize_t j = 0; j < r.shape(1); j++) { 332 for (py::ssize_t k = 0; k < r.shape(2); k++) { 333 r(i, j, k) = start++; 334 } 335 } 336 } 337 return a; 338 }); 339 sm.def("proxy_init3F", [](double start) { 340 py::array_t<double, py::array::f_style> a({3, 3, 3}); 341 auto r = a.mutable_unchecked<3>(); 342 for (py::ssize_t k = 0; k < r.shape(2); k++) { 343 for (py::ssize_t j = 0; j < r.shape(1); j++) { 344 for (py::ssize_t i = 0; i < r.shape(0); i++) { 345 r(i, j, k) = start++; 346 } 347 } 348 } 349 return a; 350 }); 351 sm.def("proxy_squared_L2_norm", [](const py::array_t<double> &a) { 352 auto r = a.unchecked<1>(); 353 double sumsq = 0; 354 for (py::ssize_t i = 0; i < r.shape(0); i++) { 355 sumsq += r[i] * r(i); // Either notation works for a 1D array 356 } 357 return sumsq; 358 }); 359 360 sm.def("proxy_auxiliaries2", [](py::array_t<double> a) { 361 auto r = a.unchecked<2>(); 362 auto r2 = a.mutable_unchecked<2>(); 363 return auxiliaries(r, r2); 364 }); 365 366 sm.def("proxy_auxiliaries1_const_ref", [](py::array_t<double> a) { 367 const auto &r = a.unchecked<1>(); 368 const auto &r2 = a.mutable_unchecked<1>(); 369 return r(0) == r2(0) && r[0] == r2[0]; 370 }); 371 372 sm.def("proxy_auxiliaries2_const_ref", [](py::array_t<double> a) { 373 const auto &r = a.unchecked<2>(); 374 const auto &r2 = a.mutable_unchecked<2>(); 375 return r(0, 0) == r2(0, 0); 376 }); 377 378 // test_array_unchecked_dyn_dims 379 // Same as the above, but without a compile-time dimensions specification: 380 sm.def( 381 "proxy_add2_dyn", 382 [](py::array_t<double> a, double v) { 383 auto r = a.mutable_unchecked(); 384 if (r.ndim() != 2) { 385 throw std::domain_error("error: ndim != 2"); 386 } 387 for (py::ssize_t i = 0; i < r.shape(0); i++) { 388 for (py::ssize_t j = 0; j < r.shape(1); j++) { 389 r(i, j) += v; 390 } 391 } 392 }, 393 py::arg{}.noconvert(), 394 py::arg()); 395 sm.def("proxy_init3_dyn", [](double start) { 396 py::array_t<double, py::array::c_style> a({3, 3, 3}); 397 auto r = a.mutable_unchecked(); 398 if (r.ndim() != 3) { 399 throw std::domain_error("error: ndim != 3"); 400 } 401 for (py::ssize_t i = 0; i < r.shape(0); i++) { 402 for (py::ssize_t j = 0; j < r.shape(1); j++) { 403 for (py::ssize_t k = 0; k < r.shape(2); k++) { 404 r(i, j, k) = start++; 405 } 406 } 407 } 408 return a; 409 }); 410 sm.def("proxy_auxiliaries2_dyn", [](py::array_t<double> a) { 411 return auxiliaries(a.unchecked(), a.mutable_unchecked()); 412 }); 413 414 sm.def("array_auxiliaries2", [](py::array_t<double> a) { return auxiliaries(a, a); }); 415 416 // test_array_failures 417 // Issue #785: Uninformative "Unknown internal error" exception when constructing array from 418 // empty object: 419 sm.def("array_fail_test", []() { return py::array(py::object()); }); 420 sm.def("array_t_fail_test", []() { return py::array_t<double>(py::object()); }); 421 // Make sure the error from numpy is being passed through: 422 sm.def("array_fail_test_negative_size", []() { 423 int c = 0; 424 return py::array(-1, &c); 425 }); 426 427 // test_initializer_list 428 // Issue (unnumbered; reported in #788): regression: initializer lists can be ambiguous 429 sm.def("array_initializer_list1", []() { return py::array_t<float>(1); }); 430 // { 1 } also works for the above, but clang warns about it 431 sm.def("array_initializer_list2", []() { return py::array_t<float>({1, 2}); }); 432 sm.def("array_initializer_list3", []() { return py::array_t<float>({1, 2, 3}); }); 433 sm.def("array_initializer_list4", []() { return py::array_t<float>({1, 2, 3, 4}); }); 434 435 // test_array_resize 436 // reshape array to 2D without changing size 437 sm.def("array_reshape2", [](py::array_t<double> a) { 438 const auto dim_sz = (py::ssize_t) std::sqrt(a.size()); 439 if (dim_sz * dim_sz != a.size()) { 440 throw std::domain_error( 441 "array_reshape2: input array total size is not a squared integer"); 442 } 443 a.resize({dim_sz, dim_sz}); 444 }); 445 446 // resize to 3D array with each dimension = N 447 sm.def("array_resize3", [](py::array_t<double> a, size_t N, bool refcheck) { 448 a.resize({N, N, N}, refcheck); 449 }); 450 451 // test_array_create_and_resize 452 // return 2D array with Nrows = Ncols = N 453 sm.def("create_and_resize", [](size_t N) { 454 py::array_t<double> a; 455 a.resize({N, N}); 456 std::fill(a.mutable_data(), a.mutable_data() + a.size(), 42.); 457 return a; 458 }); 459 460 sm.def("array_view", 461 [](py::array_t<uint8_t> a, const std::string &dtype) { return a.view(dtype); }); 462 463 sm.def("reshape_initializer_list", [](py::array_t<int> a, size_t N, size_t M, size_t O) { 464 return a.reshape({N, M, O}); 465 }); 466 sm.def("reshape_tuple", [](py::array_t<int> a, const std::vector<int> &new_shape) { 467 return a.reshape(new_shape); 468 }); 469 470 sm.def("index_using_ellipsis", 471 [](const py::array &a) { return a[py::make_tuple(0, py::ellipsis(), 0)]; }); 472 473 // test_argument_conversions 474 sm.def( 475 "accept_double", [](const py::array_t<double, 0> &) {}, py::arg("a")); 476 sm.def( 477 "accept_double_forcecast", 478 [](const py::array_t<double, py::array::forcecast> &) {}, 479 py::arg("a")); 480 sm.def( 481 "accept_double_c_style", 482 [](const py::array_t<double, py::array::c_style> &) {}, 483 py::arg("a")); 484 sm.def( 485 "accept_double_c_style_forcecast", 486 [](const py::array_t<double, py::array::forcecast | py::array::c_style> &) {}, 487 py::arg("a")); 488 sm.def( 489 "accept_double_f_style", 490 [](const py::array_t<double, py::array::f_style> &) {}, 491 py::arg("a")); 492 sm.def( 493 "accept_double_f_style_forcecast", 494 [](const py::array_t<double, py::array::forcecast | py::array::f_style> &) {}, 495 py::arg("a")); 496 sm.def( 497 "accept_double_noconvert", [](const py::array_t<double, 0> &) {}, "a"_a.noconvert()); 498 sm.def( 499 "accept_double_forcecast_noconvert", 500 [](const py::array_t<double, py::array::forcecast> &) {}, 501 "a"_a.noconvert()); 502 sm.def( 503 "accept_double_c_style_noconvert", 504 [](const py::array_t<double, py::array::c_style> &) {}, 505 "a"_a.noconvert()); 506 sm.def( 507 "accept_double_c_style_forcecast_noconvert", 508 [](const py::array_t<double, py::array::forcecast | py::array::c_style> &) {}, 509 "a"_a.noconvert()); 510 sm.def( 511 "accept_double_f_style_noconvert", 512 [](const py::array_t<double, py::array::f_style> &) {}, 513 "a"_a.noconvert()); 514 sm.def( 515 "accept_double_f_style_forcecast_noconvert", 516 [](const py::array_t<double, py::array::forcecast | py::array::f_style> &) {}, 517 "a"_a.noconvert()); 518 519 // Check that types returns correct npy format descriptor 520 sm.def("test_fmt_desc_float", [](const py::array_t<float> &) {}); 521 sm.def("test_fmt_desc_double", [](const py::array_t<double> &) {}); 522 sm.def("test_fmt_desc_const_float", [](const py::array_t<const float> &) {}); 523 sm.def("test_fmt_desc_const_double", [](const py::array_t<const double> &) {}); 524 525 sm.def("round_trip_float", [](double d) { return d; }); 526 }