github.com/vertgenlab/gonomics@v1.0.0/cmd/DEPRECATED/primateRecon/testdata/expected.unbiased99.fa (about)

     1  >hg38
     2  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
     3  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
     4  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
     5  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
     6  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
     7  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
     8  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
     9  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
    10  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
    11  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
    12  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
    13  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
    14  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
    15  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
    16  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
    17  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
    18  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
    19  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
    20  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
    21  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
    22  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
    23  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
    24  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
    25  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
    26  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
    27  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
    28  >hg38alt
    29  CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
    30  CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
    31  CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
    32  CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
    33  CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
    34  CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
    35  CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
    36  CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
    37  CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
    38  CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
    39  CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
    40  CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
    41  CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
    42  CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
    43  CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
    44  CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
    45  CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
    46  CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
    47  CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
    48  CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
    49  CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
    50  CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
    51  CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
    52  CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
    53  CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
    54  CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
    55  >panTro6
    56  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
    57  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
    58  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
    59  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
    60  AAAAAAAAAAAAAAAACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
    61  CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
    62  CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
    63  CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
    64  CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGGGGGGGGGGGGGGGGGG
    65  GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
    66  GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
    67  GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
    68  GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTT
    69  TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
    70  TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
    71  TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
    72  TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
    73  TTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
    74  NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
    75  NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
    76  NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
    77  NNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--------------------
    78  --------------------------------------------------
    79  --------------------------------------------------
    80  --------------------------------------------------
    81  ----------------------------------------------
    82  >panPan2
    83  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCCCCCCCCCCC
    84  CCCCCCCCCCCCCCCCCCCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGG
    85  GGGGGGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNN
    86  NNNNNNNNNNNNNNNNNNNNNNNNNNNNNN--------------------
    87  ----------------AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
    88  AACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGGGGGGGGGGGG
    89  GGGGGGGGGGGGGGGGGGGGGGGGTTTTTTTTTTTTTTTTTTTTTTTTTT
    90  TTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN----
    91  --------------------------------AAAAAAAAAAAAAAAAAA
    92  AAAAAAAAAAAAAAAAAACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
    93  CCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTTTTTTT
    94  TTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNN
    95  NNNNNNNNNNNN------------------------------------AA
    96  AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCCCCCCCCCCCCC
    97  CCCCCCCCCCCCCCCCCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
    98  GGGGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNN
    99  NNNNNNNNNNNNNNNNNNNNNNNNNNNN----------------------
   100  --------------AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
   101  CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGGGGGGGGGGGGGG
   102  GGGGGGGGGGGGGGGGGGGGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTT
   103  TTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN------
   104  ------------------------------AAAAAAAAAAAAAAAAAAAA
   105  AAAAAAAAAAAAAAAACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
   106  CCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTTTTTTTTT
   107  TTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNN
   108  NNNNNNNNNN------------------------------------
   109  >gorGor5
   110  AAAAAACCCCCCGGGGGGTTTTTTNNNNNN------AAAAAACCCCCCGG
   111  GGGGTTTTTTNNNNNN------AAAAAACCCCCCGGGGGGTTTTTTNNNN
   112  NN------AAAAAACCCCCCGGGGGGTTTTTTNNNNNN------AAAAAA
   113  CCCCCCGGGGGGTTTTTTNNNNNN------AAAAAACCCCCCGGGGGGTT
   114  TTTTNNNNNN------AAAAAACCCCCCGGGGGGTTTTTTNNNNNN----
   115  --AAAAAACCCCCCGGGGGGTTTTTTNNNNNN------AAAAAACCCCCC
   116  GGGGGGTTTTTTNNNNNN------AAAAAACCCCCCGGGGGGTTTTTTNN
   117  NNNN------AAAAAACCCCCCGGGGGGTTTTTTNNNNNN------AAAA
   118  AACCCCCCGGGGGGTTTTTTNNNNNN------AAAAAACCCCCCGGGGGG
   119  TTTTTTNNNNNN------AAAAAACCCCCCGGGGGGTTTTTTNNNNNN--
   120  ----AAAAAACCCCCCGGGGGGTTTTTTNNNNNN------AAAAAACCCC
   121  CCGGGGGGTTTTTTNNNNNN------AAAAAACCCCCCGGGGGGTTTTTT
   122  NNNNNN------AAAAAACCCCCCGGGGGGTTTTTTNNNNNN------AA
   123  AAAACCCCCCGGGGGGTTTTTTNNNNNN------AAAAAACCCCCCGGGG
   124  GGTTTTTTNNNNNN------AAAAAACCCCCCGGGGGGTTTTTTNNNNNN
   125  ------AAAAAACCCCCCGGGGGGTTTTTTNNNNNN------AAAAAACC
   126  CCCCGGGGGGTTTTTTNNNNNN------AAAAAACCCCCCGGGGGGTTTT
   127  TTNNNNNN------AAAAAACCCCCCGGGGGGTTTTTTNNNNNN------
   128  AAAAAACCCCCCGGGGGGTTTTTTNNNNNN------AAAAAACCCCCCGG
   129  GGGGTTTTTTNNNNNN------AAAAAACCCCCCGGGGGGTTTTTTNNNN
   130  NN------AAAAAACCCCCCGGGGGGTTTTTTNNNNNN------AAAAAA
   131  CCCCCCGGGGGGTTTTTTNNNNNN------AAAAAACCCCCCGGGGGGTT
   132  TTTTNNNNNN------AAAAAACCCCCCGGGGGGTTTTTTNNNNNN----
   133  --AAAAAACCCCCCGGGGGGTTTTTTNNNNNN------AAAAAACCCCCC
   134  GGGGGGTTTTTTNNNNNN------AAAAAACCCCCCGGGGGGTTTTTTNN
   135  NNNN------AAAAAACCCCCCGGGGGGTTTTTTNNNNNN------
   136  >ponAbe3
   137  ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-AC
   138  GTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGT
   139  N-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-
   140  ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-AC
   141  GTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGT
   142  N-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-
   143  ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-AC
   144  GTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGT
   145  N-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-
   146  ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-AC
   147  GTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGT
   148  N-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-
   149  ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-AC
   150  GTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGT
   151  N-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-
   152  ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-AC
   153  GTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGT
   154  N-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-
   155  ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-AC
   156  GTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGT
   157  N-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-
   158  ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-AC
   159  GTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGT
   160  N-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-
   161  ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-AC
   162  GTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-ACGTN-
   163  >hca
   164  AAAAAAANNNNNANAAAAANAAAAANAAAAANAAAAANAAAANCCCCCNN
   165  NNNNNNNNNNANNNNNANNNNNAAAAAANNNNNNNNNNNNANNNNNANNA
   166  AAANNAAAAAAAAANNNNNNANNNNNNNNNNNANANAAANANAAAAAAAA
   167  ANNNNNANNAAAANANAAANAAAAANAAAAAAAAAAANNNNNANNAAAAN
   168  ANAAANAAAAANAAAAANAAAANCCCCCNNNNNNNNNNNNNCNNNNNCNN
   169  NNNCNNNNCCCCCCNCCCCCNCCCCCNCCCCCNCCCCCNNNNNNCCCCCC
   170  NNNNNNNCNNNNNCNCCCNCNCCCNNNNNNCCCCCCNCNNNNNNNNNNNC
   171  CNCCNCCNCCNCNNNNCCCCCCNCNCCCNCCNCCNCCCCCNCCCCCNCNN
   172  NNCCCCCCNCNCCCNCCNCCNCCCCCNCCCCCAAAAAANNNNNNNNNNNN
   173  ANNNNNANNNAAANNNAANNNNNNCCCCCCNNNNNNNCNNNNNCNNCCNC
   174  NNCCANNNNNNCNNNNNNGGGGNNNNNNNNGNNNNNGNNNANNNNNNCNN
   175  NNNNGNGGNNNTNNNNNNNNNNNNNNANNNNNNCNNNNNNGGGGNNNNNN
   176  NNNNNNNNNNNNANNNNNNCNNNNNNGGGGNNNNNNNNNNNNNNNNNNAA
   177  AAAANNNNNNANNNNNNNNNNNANNNAAANNNAANNNNNNCCCCCCNCNN
   178  NNNNNNNNNCNNCCNCNNCCANNNNNNCNNNNNNGNNNNNNTTTNNNNNN
   179  NNNNNNANNNNNNCNNNNNNNNNNNNTTTTNNNTNNNNNTNNANNNNNNC
   180  NNNNNNNNNNNNTTTTNNNNNNNNNNNNANNNNNNCNNNNNNNNNNNNTT
   181  TTNNNNNNNNNNNNAAAAAAANNNNNANNAAAANANAAANAAAAANAAAA
   182  NCNNNNCCCCCCNCNCCCNCCNCCNCCCCCNCCCCCANNNNNNCNNNNNN
   183  GGGGNNNNNNNNNNNNNNNNNNANNNNNNCNNNNNNNNNNNNTTTTNNNN
   184  NNNNNNNNANAAAANCCCCCNNNNNNNNNNNNNNNNNNNNNNNNANAAAA
   185  NCCCCCNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAANNNNNANNAAAAN
   186  ANAAANAAAAANAAAANCNNNNCCCCCCNCNCCCNCCNCCNCCCCCNCCC
   187  CCANNNNNNCNNNNNNGGGGNNNNNNNNNNNNNNNNNNANNNNNNCNNNN
   188  NNNNNNNNTTTTNNNNNNNNNNNNANAAAANCCCCCNNNNNNNNNNNNNN
   189  NNNNNNNNNNANAAAANCCCCCNNNNNNNNNNNNNNNNNNNNNNN-